Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954894.1_cds_XP_016493592.1_83683
CDS Infomation

[gene=LOC107812922] [db_xref=GeneID:107812922] [protein=IQ domain-containing protein IQM6-like] [protein_id=XP_016493592.1] [location=join(31373..31845,31965..32079,32182..32247,32340..32428,32526..32613,33051..33290,33382..33483,34405..35136)] [gbkey=CDS]
Sequence

ATGGGAATAACATTTTCCTGTCCGTTTGCCAATTTTGAGGATCTGGATACTCGGGTTGAA
TCTTATTTGGTGAGAACATTAAGTTTAGGAAGTGATGATATGAGGATTGCATTACAGCCC
AGGAATTTCAGTGACCAAATTACTAGAAAGTCAATTTTGAAATCTTTTAGTTCTGGAAAT
ATGATCCTTGAGGGAACTCTTACCTATAAAAGGAGGGAATTTGAGGCCAAGATTGCATTG
AAGACTCTTGTATCTGACAAGGAGGATAAGAAGATCATTAGATCAGACATTATATTGAAC
GGGGAAGAAGTTTCTCCAAAACTCCATAACATATATGAGAAAGATACTAGGATGCTACCA
GCGAAATGTGGAAAACATAGAGATCAAGCTGCTGTAAAGTTGCAGAAGACATATAAAAGT
TTTCGTACCCGAAGACAGCTTGCTGATTGTGCTGTTCTAGTTGAGCAGAGATGGTGGAAG
CTATTAGATTCTGTTGAACTCAAGCACAGTTCTATATCATTCTTTGAAACTGAGAAACCT
CAAACTGCTGTTTCTCGCTGGTCAAGAGCGTTAACTAGAGCTGCTAAGGTGGGTAAAGGT
CTGTCCAAAGATGGAAAAGCACGTAAGCTTGCATTGCAACATTGGCTTGAAGCTATTGAT
CCTCGACATCGCTATGGTCATAATCTTCGATTTTATTACACCAAGTGGCTCCAAGCTGAC
AGTAAACAACCCTTCTTCTATTGGCTGGACATAGGTGAAGGTAAAGAAGTGAATCTTGAG
AGGTGCCCTAGATCAAAACTTCAACAAGAATGCATCAAGTATCTTGGTCCGATAGAGAGG
GAGGCATATGAAGTTGTCATTGTGGATGGAAAATTCATATACAAGCAGAGCAGAAGGCTG
CTAGATACAAGGGGAGGCCCTCAAGATGCAAAGTGGATCTTTGTGCTTAGCGTGTCTAAG
ATTTTGTATGTTGGGATGAAGCAAAAAGGCACATTTCAGCATTCAAGTTTCTTGGCTGGT
GGCGCCACATTGTCTGCGGGGAGATTAGTGGCGGAAGATGGTGTTATAAAGGCGGTCTGG
CCTCAGAGTGGACATTACCTCCCCACAGAGGAGAATTTTGAAGCATTCATGTTATTTCTT
AAGCAACATAATGTTGATGTCTCTATTGTTCAGAAATTCACAAATTATGAGGAAGCTCCC
TTTATCAGGATGGAATGCGGTGTCAACATACGTAATAACTTATCAGCCTCAGATTTCAGC
CAATCCAATGAAGAGAGCAACCTCAAAAGCTCAGACACAATTACAAAGAAGATTGATTCT
ACTAACAAGGATGACTCAAGGCAGCCCAGAGTATCACGACCCAAAATTTCTGTTGAAATA
CCAGAAAGGGAAGGCATTCTCAAGTTGTTTAAGGAGACGGGCCAAGAACCAAAAGACAGC
ATGCTGCAGCCCGTGGAAACTCCAGCAGATGGATATGAGACACCAGAAGAATATTTATCG
GATACGGAATGTTCAGTTTCAAAGAAGAATTTATTTGATCATGAAAATGAAGATGAGAAC
AAAGAATCTGTACCCGAAGAAAAGATAATCAAGAGAATAAATTCACATATAGGTAAAAAG
TCATATCAATTGGCTCATCAATTTTCTTGCAGATGGACAACTGGAGCTGGACCTCGTATT
GGATGCATGAGGGACTATCCGTCCGAGCTCCAATTTCGCGTTATGGAGGAGGTGCATTTG
TCTCCAAGAACTGCTTTTTCAACTCCCTCAAAATCTGCTCCTCGTTATACTCCTACTATC
TTTTCTAGAGAAGCAACTGAAGGCAAAAGACCTAGTTTTGAAGTGGTGGTATTCTCTGAA
CAAGATAGTACTCCATCAGTAAAAAGAGATGCGAGTTTTGACTGA

Peptide Sequence

PEP ID

XP_016493592.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM6-like [Nicotiana tabacum]
Sequence

MGITFSCPFANFEDLDTRVESYLVRTLSLGSDDMRIALQPRNFSDQITRKSILKSFSSGN
MILEGTLTYKRREFEAKIALKTLVSDKEDKKIIRSDIILNGEEVSPKLHNIYEKDTRMLP
AKCGKHRDQAAVKLQKTYKSFRTRRQLADCAVLVEQRWWKLLDSVELKHSSISFFETEKP
QTAVSRWSRALTRAAKVGKGLSKDGKARKLALQHWLEAIDPRHRYGHNLRFYYTKWLQAD
SKQPFFYWLDIGEGKEVNLERCPRSKLQQECIKYLGPIEREAYEVVIVDGKFIYKQSRRL
LDTRGGPQDAKWIFVLSVSKILYVGMKQKGTFQHSSFLAGGATLSAGRLVAEDGVIKAVW
PQSGHYLPTEENFEAFMLFLKQHNVDVSIVQKFTNYEEAPFIRMECGVNIRNNLSASDFS
QSNEESNLKSSDTITKKIDSTNKDDSRQPRVSRPKISVEIPEREGILKLFKETGQEPKDS
MLQPVETPADGYETPEEYLSDTECSVSKKNLFDHENEDENKESVPEEKIIKRINSHIGKK
SYQLAHQFSCRWTTGAGPRIGCMRDYPSELQFRVMEEVHLSPRTAFSTPSKSAPRYTPTI
FSREATEGKRPSFEVVVFSEQDSTPSVKRDASFD

Transcript Sequence

Gene sequence data has not been registered.